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Tree-RingLaboratory
LamontDohertyEarthObservatory
ofColumbiaUniversity
Palisades,NY
Introduction
ProgramARSTANisthepersonalresearchprojectofDr.EdwardR.Cook,evolvingoutofhisgraduateworkattheUniversityofArizonainthe1980swhenthescienceofdendrochronologywasstrugglingwithextractingmeaningfultree-ringinformationfromclosedcanopyforesttrees.TheARSTANmethodology(AutoRegressiveSTANdardization)wasdevelopedtodealwithacertainclassofproblemthatiscommontotreesgrowinginclosed-canopyforestenvironments:
the“endogenousdisturbance”problem.
AdetaileddescriptionoftheARSTANmethodologyiscontainedinCook’sPhDDissertation“ATime-SeriesAnalysisApproachtoTree-RingStandardizationandwillnotberepeatedhere.Rather,acopyofthatdissertationisenclosedinthisfolderforthosewhowishtolearnmoreaboutit.
Whatyoudowiththeprogramisultimatelyuptoyou,butbeadvisedthatspecializedsoftwareisonlyasvaluabletotheuserastheuser’sunderstandingofwhatthesoftwaredoes.InanattempttomaketheprogrammoreuserfriendlyARSTANcanmakeaplotatalmosteverypointintheprogramwherethereisasignificanttransformationoftherawdata.Usethisfeaturetohelpyouseewhatisgoingonwithyourdataandhelpyouinterpretbettertheresults.
Disclaimer
Theauthorsassumenoresponsibilityfortheuseandsupportofthisprogram.Ofcoursewewouldwanttoknowaboutanysituationthatproducesanincorrectcomputationoranimpossibleresult.However,whatyoudowiththeprogramandhowyoudoit,isyourbusiness.
SystemRequirementsandInstallation
ProgramARSTANwasdevelopedentirelyonMacintoshcomputers.WhatthismeansisweknowmoreaboutthebehavioroftheprogramonMacsthanonanyothermachine.TheWindowsportoftheprogramisnewasofJanuary2005.Weareconstantlyusingtheprogramandupdateswillappearonourwebsitefromtimetotime.Ifyouareexperiencingproblemsgettingtheprogramtorunonyourcomputerandyouarerunningoneofthetwooperatingsystemsmentionedbelow,pleaseletusknow.Beadvisedtheprogramcantaxyourcomputersabilitiesresultinginwhatmayappearasacrash.Thisisnotunusualwhencalculatingbootstrappedconfidencelimitsonasitewith100’sofseriescoveringthesametimeinterval.Bepatientbeforereachingfortheresetbuttonorctrl_alt_deleting.Itisagoodideatoruntheprogramonmachineswithatleast300mbofavailableRAM.Forlargerdatasets,500mbormoreisnice.
MacintoshOSX
1.Itisadvisable,butnotnecessary,forallMacuserstoinstallthe“AppleDeveloperTools”toolboxforOSX10.1-10.2,oriToolsforOSX10.3andgreater.ThesemaybedownloadedforfreefromApples“developer”website.
2.Putthefolder“Absoft”inyourcomputersApplicationsfolder.
3.Copyormovetheapplication(executable)toanylocationonyourcomputerforuse.
4.Allinputfilesmustresideinthesamefolderastheapplication.
WindowsXPHome/Professional
1.Copythefolder“Absoft80”(withitscontents)toyourc:
drive.
2.Continuefromstep3above.
Note:
Thefollowingstepsmayormaynotbenecessarydependingontheoperatingsystemyouareusing.Trytheprogramfirstbeforecontinuing.
Rightclickon"
MyComputer"
andselectproperties.Locatethe"
EnvironmentVariables"
sectionofthepropertieswindow(inthe"
Advanced"
tabinWindows2000)andaddanewvariableforeitheryourusernameorsystemwide.Thevariablenamemustbecalled"
PLPLOT_LIB"
andthevaluemustbe:
C:
\Absoft80\examples\PLPLOT\examples
Windows98usersmayneedtoaddtheenvironmentvariabletoyourc:
\autoexec.batfilebytypingthefollowingline:
setPLPLOT_LIB=C:
Importantnoteaboutinputandoutputfiletypes
MacintoshUsers:
ThefiletypeofallARSTANinputandoutputfilesare“unix”.
WindowsUsers:
Thefiletypeis“dos”.
USERSGUIDE.
ProgramARSTANisaFORTRANprogramwithoutalotofamenitieslikedropanddragmousemovements,dropdownwindows,allthegreatstuffweexpectfromsoftwaretoday.It’satopdownprogram,meaningyousetituptodowhatyouwantfirst,thenyouletitrun.Therearethreeprinciplemodesforrunningtheprogram,interactive,commandandbatch.In“interactive”modeyouenterthenameofafilecontainingring-widthdata,youconfigurealltheoptionstoperformonthedatawithinthefile,hitreturnfor“nomoreoptions”andletitrun.
DuringaninteractivemoderunARSTANproducesalogfile,orcommandfile.Thistextfile(“<
i